Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LSP1P33241 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 MMP23A-201ENST00000234610 1017 ntBASIC16.54■□□□□ 0.24
LSP1P33241 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
LSP1P33241 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.54■□□□□ 0.24
LSP1P33241 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.54■□□□□ 0.24
LSP1P33241 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 PGM5P2-202ENST00000637225 1043 ntBASIC16.54■□□□□ 0.24
LSP1P33241 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LSP1P33241 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.54■□□□□ 0.24
LSP1P33241 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.54■□□□□ 0.24
LSP1P33241 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 AC005840.4-201ENST00000541242 2494 ntBASIC16.54■□□□□ 0.24
LSP1P33241 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LSP1P33241 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LSP1P33241 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 ACTG1P4-201ENST00000425123 1122 ntBASIC16.53■□□□□ 0.24
LSP1P33241 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 NUS1P1-201ENST00000446295 882 ntBASIC16.53■□□□□ 0.24
LSP1P33241 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.53■□□□□ 0.24
LSP1P33241 AC010654.1-201ENST00000615722 808 ntBASIC16.53■□□□□ 0.24
LSP1P33241 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.53■□□□□ 0.24
LSP1P33241 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.53■□□□□ 0.24
LSP1P33241 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 GPAA1P2-202ENST00000606848 1787 ntBASIC16.53■□□□□ 0.24
LSP1P33241 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.53■□□□□ 0.24
LSP1P33241 AC013726.1-201ENST00000563747 2285 ntBASIC16.53■□□□□ 0.24
LSP1P33241 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LSP1P33241 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LSP1P33241 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.52■□□□□ 0.24
LSP1P33241 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.52■□□□□ 0.24
LSP1P33241 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.52■□□□□ 0.24
LSP1P33241 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.52■□□□□ 0.24
LSP1P33241 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.52■□□□□ 0.24
LSP1P33241 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 ECEL1P3-201ENST00000427961 737 ntBASIC16.52■□□□□ 0.24
LSP1P33241 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.52■□□□□ 0.24
LSP1P33241 NAPSB-206ENST00000562112 1266 ntBASIC16.52■□□□□ 0.24
LSP1P33241 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.52■□□□□ 0.24
LSP1P33241 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LSP1P33241 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSP1P33241 AC067930.6-201ENST00000623257 4947 ntBASIC16.52■□□□□ 0.24
LSP1P33241 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LSP1P33241 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSP1P33241 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.52■□□□□ 0.23
LSP1P33241 AC007686.3-201ENST00000619017 3487 ntBASIC16.52■□□□□ 0.23
LSP1P33241 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.52■□□□□ 0.23
LSP1P33241 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSP1P33241 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.52■□□□□ 0.23
LSP1P33241 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSP1P33241 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LSP1P33241 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms