Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA3P32297 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA3P32297 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA3P32297 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA3P32297 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRNA3P32297 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA3P32297 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CHRNA3P32297 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CHRNA3P32297 AC023274.1-201ENST00000418278 595 ntBASIC17.35■□□□□ 0.37
CHRNA3P32297 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA3P32297 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 MIR4492-201ENST00000581627 80 ntBASIC17.35■□□□□ 0.37
CHRNA3P32297 MPDU1-223ENST00000582151 728 ntBASIC17.35■□□□□ 0.37
CHRNA3P32297 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA3P32297 GPALPP1-207ENST00000611650 899 ntBASIC17.35■□□□□ 0.37
CHRNA3P32297 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.35■□□□□ 0.37
CHRNA3P32297 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA3P32297 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA3P32297 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA3P32297 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA3P32297 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA3P32297 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA3P32297 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA3P32297 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA3P32297 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.34■□□□□ 0.37
CHRNA3P32297 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA3P32297 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CHRNA3P32297 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.34■□□□□ 0.37
CHRNA3P32297 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA3P32297 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.34■□□□□ 0.37
CHRNA3P32297 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA3P32297 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 LINC00554-201ENST00000564841 3011 ntBASIC17.34■□□□□ 0.37
CHRNA3P32297 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 OR7E47P-204ENST00000575924 449 ntBASIC17.34■□□□□ 0.37
CHRNA3P32297 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA3P32297 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNA3P32297 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CHRNA3P32297 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA3P32297 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA3P32297 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA3P32297 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA3P32297 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA3P32297 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA3P32297 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRNA3P32297 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA3P32297 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRNA3P32297 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CHRNA3P32297 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRNA3P32297 AC010491.1-201ENST00000563101 2797 ntBASIC17.33■□□□□ 0.36
CHRNA3P32297 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRNA3P32297 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms