Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.6□□□□□ -0.07
HOXC12P31275 AL671277.1-201ENST00000429656 993 ntBASIC14.6□□□□□ -0.07
HOXC12P31275 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.6□□□□□ -0.07
HOXC12P31275 AC093214.1-201ENST00000511688 1107 ntBASIC14.6□□□□□ -0.07
HOXC12P31275 IGHV3-62-201ENST00000520057 340 ntBASIC14.6□□□□□ -0.07
HOXC12P31275 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.6□□□□□ -0.07
HOXC12P31275 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 DUX4L27-201ENST00000554796 1261 ntBASIC14.6□□□□□ -0.07
HOXC12P31275 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.6□□□□□ -0.07
HOXC12P31275 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.6□□□□□ -0.07
HOXC12P31275 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HOXC12P31275 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HOXC12P31275 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 WASH6P-202ENST00000359512 1437 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HOXC12P31275 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 AC012313.1-201ENST00000593393 3059 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.59□□□□□ -0.07
HOXC12P31275 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 GK-202ENST00000378941 458 ntTSL 3 BASIC14.59□□□□□ -0.07
HOXC12P31275 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 KRT18P34-201ENST00000488218 1270 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.59□□□□□ -0.07
HOXC12P31275 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.59□□□□□ -0.07
HOXC12P31275 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.59□□□□□ -0.07
HOXC12P31275 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.59□□□□□ -0.07
HOXC12P31275 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
HOXC12P31275 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.59□□□□□ -0.07
HOXC12P31275 AC009093.7-201ENST00000623853 1223 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.59□□□□□ -0.07
HOXC12P31275 AL139011.1-202ENST00000642063 584 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HOXC12P31275 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 AKAP8P1-201ENST00000434743 1349 ntBASIC14.59□□□□□ -0.07
HOXC12P31275 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HOXC12P31275 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HOXC12P31275 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HOXC12P31275 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HOXC12P31275 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HOXC12P31275 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HOXC12P31275 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HOXC12P31275 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HOXC12P31275 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
HOXC12P31275 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HOXC12P31275 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 AC005915.1-201ENST00000624912 2018 ntBASIC14.58□□□□□ -0.08
HOXC12P31275 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.58□□□□□ -0.08
HOXC12P31275 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.58□□□□□ -0.08
HOXC12P31275 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.58□□□□□ -0.08
HOXC12P31275 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
HOXC12P31275 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.58□□□□□ -0.08
HOXC12P31275 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HOXC12P31275 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms