Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB4AP20338 AC131902.2-201ENST00000566892 2172 ntBASIC12.67□□□□□ -0.38
RAB4AP20338 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB4AP20338 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB4AP20338 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB4AP20338 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 SEC1P-202ENST00000473944 940 ntBASIC12.66□□□□□ -0.38
RAB4AP20338 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB4AP20338 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB4AP20338 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB4AP20338 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.66□□□□□ -0.38
RAB4AP20338 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB4AP20338 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB4AP20338 LINC00528-201ENST00000600723 2160 ntBASIC12.66□□□□□ -0.38
RAB4AP20338 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 AC023157.3-201ENST00000619086 2088 ntBASIC12.65□□□□□ -0.38
RAB4AP20338 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 AL355802.2-201ENST00000402069 882 ntBASIC12.65□□□□□ -0.38
RAB4AP20338 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 AC124947.2-201ENST00000547118 1133 ntBASIC12.65□□□□□ -0.38
RAB4AP20338 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
RAB4AP20338 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
RAB4AP20338 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RAB4AP20338 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB4AP20338 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RAB4AP20338 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB4AP20338 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.65□□□□□ -0.39
RAB4AP20338 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms