Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1DP16402 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1DP16402 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1DP16402 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H1DP16402 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H1DP16402 AC067930.6-201ENST00000623257 4947 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AL592424.1-201ENST00000563624 1536 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 HCG4-201ENST00000418983 998 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AC005412.3-201ENST00000580309 715 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 NPAP1P7-201ENST00000613027 823 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 PGM5P2-202ENST00000637225 1043 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AC016027.1-202ENST00000607927 1699 ntBASIC13.97□□□□□ -0.17
HIST1H1DP16402 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HIST1H1DP16402 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HIST1H1DP16402 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 AC092850.2-201ENST00000623821 2697 ntBASIC13.96□□□□□ -0.17
HIST1H1DP16402 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 AL805961.1-202ENST00000641562 540 ntBASIC13.96□□□□□ -0.17
HIST1H1DP16402 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
HIST1H1DP16402 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HIST1H1DP16402 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.18
HIST1H1DP16402 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HIST1H1DP16402 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H1DP16402 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H1DP16402 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HIST1H1DP16402 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.96□□□□□ -0.18
HIST1H1DP16402 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.96□□□□□ -0.18
HIST1H1DP16402 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1DP16402 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1DP16402 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HIST1H1DP16402 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms