Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
PEPDP12955 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PEPDP12955 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 AL513523.2-202ENST00000427283 2040 ntBASIC15.26■□□□□ 0.03
PEPDP12955 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PEPDP12955 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
PEPDP12955 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 KRT19P2-202ENST00000557173 1012 ntBASIC15.26■□□□□ 0.03
PEPDP12955 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.26■□□□□ 0.03
PEPDP12955 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.26■□□□□ 0.03
PEPDP12955 PDPK2P-202ENST00000562415 1191 ntBASIC15.26■□□□□ 0.03
PEPDP12955 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 AC005412.3-201ENST00000580309 715 ntBASIC15.26■□□□□ 0.03
PEPDP12955 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 ACTL9-202ENST00000612068 1252 ntBASIC15.26■□□□□ 0.03
PEPDP12955 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
PEPDP12955 AC006538.1-201ENST00000567905 1585 ntBASIC15.26■□□□□ 0.03
PEPDP12955 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PEPDP12955 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PEPDP12955 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.26■□□□□ 0.03
PEPDP12955 AC025580.3-201ENST00000617932 1424 ntBASIC15.26■□□□□ 0.03
PEPDP12955 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PEPDP12955 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.25■□□□□ 0.03
PEPDP12955 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PEPDP12955 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
PEPDP12955 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
PEPDP12955 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.25■□□□□ 0.03
PEPDP12955 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.25■□□□□ 0.03
PEPDP12955 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.25■□□□□ 0.03
PEPDP12955 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PEPDP12955 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.25■□□□□ 0.03
PEPDP12955 AC074386.1-202ENST00000463561 864 ntBASIC15.25■□□□□ 0.03
PEPDP12955 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.25■□□□□ 0.03
PEPDP12955 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PEPDP12955 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PEPDP12955 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.25■□□□□ 0.03
PEPDP12955 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.25■□□□□ 0.03
PEPDP12955 AL645728.2-201ENST00000641974 660 ntBASIC15.25■□□□□ 0.03
PEPDP12955 AC092865.6-201ENST00000642101 219 ntBASIC15.25■□□□□ 0.03
PEPDP12955 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PEPDP12955 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PEPDP12955 AC068418.2-201ENST00000577309 3703 ntBASIC15.25■□□□□ 0.03
PEPDP12955 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PEPDP12955 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PEPDP12955 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms