Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 FAM197Y3-203ENST00000618346 717 ntBASIC17.02■□□□□ 0.32
CD48P09326 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CD48P09326 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CD48P09326 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CD48P09326 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD48P09326 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD48P09326 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.02■□□□□ 0.31
CD48P09326 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD48P09326 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.02■□□□□ 0.31
CD48P09326 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.02■□□□□ 0.31
CD48P09326 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
CD48P09326 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.02■□□□□ 0.31
CD48P09326 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 AC023274.1-201ENST00000418278 595 ntBASIC17.01■□□□□ 0.31
CD48P09326 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.01■□□□□ 0.31
CD48P09326 AL591424.1-201ENST00000442569 1213 ntBASIC17.01■□□□□ 0.31
CD48P09326 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.01■□□□□ 0.31
CD48P09326 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.01■□□□□ 0.31
CD48P09326 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.01■□□□□ 0.31
CD48P09326 AC099522.2-201ENST00000607001 744 ntBASIC17.01■□□□□ 0.31
CD48P09326 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 AC073439.1-201ENST00000624121 1774 ntBASIC17.01■□□□□ 0.31
CD48P09326 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.01■□□□□ 0.31
CD48P09326 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.01■□□□□ 0.31
CD48P09326 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
CD48P09326 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD48P09326 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CD48P09326 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17■□□□□ 0.31
CD48P09326 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD48P09326 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17■□□□□ 0.31
CD48P09326 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17■□□□□ 0.31
CD48P09326 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 HNRNPA1P28-201ENST00000424481 961 ntBASIC17■□□□□ 0.31
CD48P09326 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17■□□□□ 0.31
CD48P09326 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 KRT18P34-201ENST00000488218 1270 ntBASIC17■□□□□ 0.31
CD48P09326 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17■□□□□ 0.31
CD48P09326 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17■□□□□ 0.31
CD48P09326 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17■□□□□ 0.31
CD48P09326 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17■□□□□ 0.31
CD48P09326 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD48P09326 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17■□□□□ 0.31
CD48P09326 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CD48P09326 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CD48P09326 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD48P09326 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD48P09326 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
CD48P09326 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms