Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 AL691432.1-201ENST00000596308 1422 ntBASIC18.34■□□□□ 0.53
CYP3A4P08684 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.34■□□□□ 0.53
CYP3A4P08684 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.34■□□□□ 0.53
CYP3A4P08684 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.34■□□□□ 0.53
CYP3A4P08684 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CYP3A4P08684 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.34■□□□□ 0.53
CYP3A4P08684 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.34■□□□□ 0.53
CYP3A4P08684 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 AC027369.6-201ENST00000525520 931 ntBASIC18.34■□□□□ 0.53
CYP3A4P08684 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.34■□□□□ 0.53
CYP3A4P08684 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CYP3A4P08684 AL590560.3-201ENST00000623350 461 ntBASIC18.34■□□□□ 0.53
CYP3A4P08684 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.34■□□□□ 0.53
CYP3A4P08684 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CYP3A4P08684 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.34■□□□□ 0.53
CYP3A4P08684 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CYP3A4P08684 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.34■□□□□ 0.53
CYP3A4P08684 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CYP3A4P08684 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CYP3A4P08684 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYP3A4P08684 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYP3A4P08684 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYP3A4P08684 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.33■□□□□ 0.53
CYP3A4P08684 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYP3A4P08684 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.33■□□□□ 0.53
CYP3A4P08684 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CYP3A4P08684 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CYP3A4P08684 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.33■□□□□ 0.53
CYP3A4P08684 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYP3A4P08684 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CYP3A4P08684 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYP3A4P08684 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.33■□□□□ 0.52
CYP3A4P08684 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.33■□□□□ 0.52
CYP3A4P08684 AL080243.2-201ENST00000418783 582 ntBASIC18.33■□□□□ 0.52
CYP3A4P08684 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.33■□□□□ 0.52
CYP3A4P08684 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.33■□□□□ 0.52
CYP3A4P08684 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYP3A4P08684 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 TEX28P1-201ENST00000613479 1221 ntBASIC18.33■□□□□ 0.52
CYP3A4P08684 TEX28P2-201ENST00000617764 1221 ntBASIC18.33■□□□□ 0.52
CYP3A4P08684 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYP3A4P08684 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYP3A4P08684 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.33■□□□□ 0.52
CYP3A4P08684 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.33■□□□□ 0.52
CYP3A4P08684 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYP3A4P08684 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 KRT8P12-202ENST00000472924 1397 ntBASIC18.32■□□□□ 0.52
CYP3A4P08684 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CYP3A4P08684 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CYP3A4P08684 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 TSSK5P-201ENST00000423978 907 ntBASIC18.32■□□□□ 0.52
CYP3A4P08684 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.32■□□□□ 0.52
CYP3A4P08684 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CYP3A4P08684 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.32■□□□□ 0.52
CYP3A4P08684 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.32■□□□□ 0.52
CYP3A4P08684 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.32■□□□□ 0.52
CYP3A4P08684 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 CYP4F24P-201ENST00000586049 1580 ntBASIC18.32■□□□□ 0.52
CYP3A4P08684 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYP3A4P08684 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms