Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TPM2P07951 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TPM2P07951 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.77■□□□□ 0.59
TPM2P07951 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TPM2P07951 AL122018.1-201ENST00000446607 2310 ntBASIC18.77■□□□□ 0.59
TPM2P07951 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TPM2P07951 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TPM2P07951 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.77■□□□□ 0.59
TPM2P07951 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TPM2P07951 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TPM2P07951 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM2P07951 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TPM2P07951 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM2P07951 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM2P07951 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM2P07951 AL049597.2-201ENST00000565575 961 ntBASIC18.76■□□□□ 0.59
TPM2P07951 AP005901.3-202ENST00000581653 237 ntBASIC18.76■□□□□ 0.59
TPM2P07951 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM2P07951 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM2P07951 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 AC067930.6-201ENST00000623257 4947 ntBASIC18.76■□□□□ 0.59
TPM2P07951 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 INTS4P1-201ENST00000438455 1935 ntBASIC18.76■□□□□ 0.59
TPM2P07951 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM2P07951 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TPM2P07951 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM2P07951 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM2P07951 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TPM2P07951 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TPM2P07951 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TPM2P07951 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TPM2P07951 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
TPM2P07951 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TPM2P07951 DRAXINP1-201ENST00000437611 948 ntBASIC18.75■□□□□ 0.59
TPM2P07951 KRT17P6-201ENST00000453795 1220 ntBASIC18.75■□□□□ 0.59
TPM2P07951 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM2P07951 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM2P07951 AL603832.2-201ENST00000566195 2125 ntBASIC18.75■□□□□ 0.59
TPM2P07951 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TPM2P07951 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TPM2P07951 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TPM2P07951 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.75■□□□□ 0.59
TPM2P07951 AL021920.2-201ENST00000624828 1351 ntBASIC18.75■□□□□ 0.59
TPM2P07951 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TPM2P07951 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TPM2P07951 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM2P07951 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM2P07951 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM2P07951 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TPM2P07951 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM2P07951 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TPM2P07951 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM2P07951 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM2P07951 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM2P07951 PMPCAP1-201ENST00000508114 1576 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms