Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC073347.1-201ENST00000421633 2643 ntBASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AKR1C7P-201ENST00000305623 895 ntBASIC14.84□□□□□ -0.03
HLA-DPB1P04440 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 SPDYE21P-201ENST00000413323 827 ntBASIC14.84□□□□□ -0.03
HLA-DPB1P04440 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC106795.1-205ENST00000512851 1056 ntBASIC14.84□□□□□ -0.03
HLA-DPB1P04440 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC008608.2-201ENST00000606089 416 ntBASIC14.84□□□□□ -0.03
HLA-DPB1P04440 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 REXO1L6P-202ENST00000619970 1078 ntBASIC14.84□□□□□ -0.03
HLA-DPB1P04440 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DPB1P04440 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DPB1P04440 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 ACTG1P4-201ENST00000425123 1122 ntBASIC14.83□□□□□ -0.04
HLA-DPB1P04440 EMBP1-201ENST00000458200 901 ntBASIC14.83□□□□□ -0.04
HLA-DPB1P04440 BX005266.1-201ENST00000473402 457 ntBASIC14.83□□□□□ -0.04
HLA-DPB1P04440 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 AC079776.2-201ENST00000641154 1609 ntBASIC14.83□□□□□ -0.04
HLA-DPB1P04440 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPB1P04440 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms