Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
C1RP00736 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.22■□□□□ 0.35
C1RP00736 AC104794.3-201ENST00000566840 1248 ntBASIC17.22■□□□□ 0.35
C1RP00736 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
C1RP00736 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
C1RP00736 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.22■□□□□ 0.35
C1RP00736 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.22■□□□□ 0.35
C1RP00736 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
C1RP00736 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.22■□□□□ 0.35
C1RP00736 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
C1RP00736 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C1RP00736 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
C1RP00736 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C1RP00736 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 AL391256.1-201ENST00000443260 1855 ntBASIC17.21■□□□□ 0.35
C1RP00736 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.21■□□□□ 0.35
C1RP00736 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.21■□□□□ 0.35
C1RP00736 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
C1RP00736 HLA-J-202ENST00000469281 1241 ntBASIC17.21■□□□□ 0.35
C1RP00736 AC011495.1-201ENST00000498085 584 ntBASIC17.21■□□□□ 0.35
C1RP00736 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 DOC2GP-202ENST00000514950 1163 ntBASIC17.21■□□□□ 0.35
C1RP00736 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.21■□□□□ 0.35
C1RP00736 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 AL512361.1-201ENST00000554200 418 ntBASIC17.21■□□□□ 0.35
C1RP00736 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.21■□□□□ 0.35
C1RP00736 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.21■□□□□ 0.35
C1RP00736 MIR6069-201ENST00000620069 79 ntBASIC17.21■□□□□ 0.35
C1RP00736 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
C1RP00736 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.21■□□□□ 0.35
C1RP00736 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
C1RP00736 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 AC022211.2-201ENST00000585075 2527 ntBASIC17.21■□□□□ 0.35
C1RP00736 AL512652.2-201ENST00000625156 1716 ntBASIC17.21■□□□□ 0.35
C1RP00736 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C1RP00736 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.21■□□□□ 0.34
C1RP00736 AD000864.1-201ENST00000624076 2295 ntBASIC17.21■□□□□ 0.34
C1RP00736 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
C1RP00736 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.2■□□□□ 0.34
C1RP00736 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.2■□□□□ 0.34
C1RP00736 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.2■□□□□ 0.34
C1RP00736 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.2■□□□□ 0.34
C1RP00736 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C1RP00736 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C1RP00736 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.2■□□□□ 0.34
C1RP00736 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
C1RP00736 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
C1RP00736 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C1RP00736 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms