Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 GPS2P2-201ENST00000430745 888 ntBASIC16.85■□□□□ 0.29
MT-CO1P00395 KRT18P34-201ENST00000488218 1270 ntBASIC16.85■□□□□ 0.29
MT-CO1P00395 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 AC027796.2-201ENST00000575326 344 ntBASIC16.85■□□□□ 0.29
MT-CO1P00395 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.85■□□□□ 0.29
MT-CO1P00395 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.85■□□□□ 0.29
MT-CO1P00395 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.85■□□□□ 0.29
MT-CO1P00395 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 AC009093.7-201ENST00000623853 1223 ntBASIC16.85■□□□□ 0.29
MT-CO1P00395 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-CO1P00395 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-CO1P00395 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-CO1P00395 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-CO1P00395 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MT-CO1P00395 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 MIR346-201ENST00000362234 95 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 KRT18P32-201ENST00000424695 1287 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-CO1P00395 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-CO1P00395 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-CO1P00395 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 SLC25A39P2-201ENST00000537614 270 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 KRT8P23-201ENST00000560090 1207 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 AP000842.3-202ENST00000569238 1080 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 LINC00628-201ENST00000628516 1289 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
MT-CO1P00395 AC084121.4-201ENST00000641598 221 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 AF228730.8-201ENST00000642140 221 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 AL662844.4-201ENST00000606367 2838 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 GGT4P-201ENST00000623672 1708 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 HLA-A-202ENST00000376806 1854 ntBASIC16.84■□□□□ 0.29
MT-CO1P00395 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-CO1P00395 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-CO1P00395 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
MT-CO1P00395 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MT-CO1P00395 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.29
MT-CO1P00395 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
MT-CO1P00395 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-CO1P00395 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-CO1P00395 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-CO1P00395 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.83■□□□□ 0.29
MT-CO1P00395 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MT-CO1P00395 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
MT-CO1P00395 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
MT-CO1P00395 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MT-CO1P00395 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms