Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK1BO75841 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.34□□□□□ -0.11
UPK1BO75841 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.34□□□□□ -0.11
UPK1BO75841 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.34□□□□□ -0.11
UPK1BO75841 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UPK1BO75841 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 MYO15B-237ENST00000642007 4893 ntBASIC14.34□□□□□ -0.11
UPK1BO75841 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1BO75841 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UPK1BO75841 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UPK1BO75841 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1BO75841 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.33□□□□□ -0.11
UPK1BO75841 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 AC090616.6-203ENST00000579186 1945 ntBASIC14.33□□□□□ -0.11
UPK1BO75841 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UPK1BO75841 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 REXO1L1P-202ENST00000608646 1974 ntBASIC14.33□□□□□ -0.12
UPK1BO75841 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.33□□□□□ -0.12
UPK1BO75841 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
UPK1BO75841 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.33□□□□□ -0.12
UPK1BO75841 CRYGFP-201ENST00000418459 633 ntBASIC14.33□□□□□ -0.12
UPK1BO75841 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK1BO75841 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.33□□□□□ -0.12
UPK1BO75841 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK1BO75841 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 AC009336.1-201ENST00000608941 1553 ntBASIC14.33□□□□□ -0.12
UPK1BO75841 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
UPK1BO75841 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.33□□□□□ -0.12
UPK1BO75841 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 C18orf15-201ENST00000623680 2534 ntBASIC14.33□□□□□ -0.12
UPK1BO75841 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UPK1BO75841 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1BO75841 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1BO75841 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1BO75841 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 SLC25A1P2-201ENST00000430693 912 ntBASIC14.32□□□□□ -0.12
UPK1BO75841 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.32□□□□□ -0.12
UPK1BO75841 AL138781.1-201ENST00000566567 1274 ntBASIC14.32□□□□□ -0.12
UPK1BO75841 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.32□□□□□ -0.12
UPK1BO75841 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 AL157888.1-201ENST00000631930 593 ntBASIC14.32□□□□□ -0.12
UPK1BO75841 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.32□□□□□ -0.12
UPK1BO75841 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
UPK1BO75841 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
UPK1BO75841 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UPK1BO75841 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
UPK1BO75841 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms