Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
SRGAP3O43295 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRGAP3O43295 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.33■□□□□ 0.85
SRGAP3O43295 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SRGAP3O43295 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SRGAP3O43295 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.33■□□□□ 0.85
SRGAP3O43295 PMS2P2-201ENST00000425039 1128 ntBASIC20.33■□□□□ 0.85
SRGAP3O43295 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SRGAP3O43295 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.33■□□□□ 0.85
SRGAP3O43295 RNA5SP410-201ENST00000516285 106 ntBASIC20.33■□□□□ 0.85
SRGAP3O43295 AL512356.2-201ENST00000546955 174 ntBASIC20.33■□□□□ 0.85
SRGAP3O43295 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.33■□□□□ 0.84
SRGAP3O43295 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SRGAP3O43295 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.33■□□□□ 0.84
SRGAP3O43295 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.33■□□□□ 0.84
SRGAP3O43295 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SRGAP3O43295 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SRGAP3O43295 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRGAP3O43295 PCDHB19P-201ENST00000570871 2371 ntBASIC20.32■□□□□ 0.84
SRGAP3O43295 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.32■□□□□ 0.84
SRGAP3O43295 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.32■□□□□ 0.84
SRGAP3O43295 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 AC025678.2-201ENST00000562061 970 ntBASIC20.32■□□□□ 0.84
SRGAP3O43295 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 Z92544.3-201ENST00000624747 417 ntBASIC20.32■□□□□ 0.84
SRGAP3O43295 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRGAP3O43295 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SRGAP3O43295 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SRGAP3O43295 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SRGAP3O43295 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 AC008677.1-201ENST00000519230 1561 ntBASIC20.31■□□□□ 0.84
SRGAP3O43295 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.31■□□□□ 0.84
SRGAP3O43295 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.31■□□□□ 0.84
SRGAP3O43295 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.31■□□□□ 0.84
SRGAP3O43295 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.31■□□□□ 0.84
SRGAP3O43295 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.31■□□□□ 0.84
SRGAP3O43295 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.31■□□□□ 0.84
SRGAP3O43295 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SRGAP3O43295 AC006449.5-201ENST00000610658 2098 ntBASIC20.31■□□□□ 0.84
SRGAP3O43295 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
SRGAP3O43295 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
SRGAP3O43295 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SRGAP3O43295 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRGAP3O43295 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.3■□□□□ 0.84
SRGAP3O43295 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.3■□□□□ 0.84
SRGAP3O43295 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRGAP3O43295 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms