Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXC11O43248 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC11O43248 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC11O43248 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC11O43248 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC11O43248 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC11O43248 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 U82695.1-201ENST00000635752 1889 ntBASIC16.63■□□□□ 0.25
HOXC11O43248 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXC11O43248 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
HOXC11O43248 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC11O43248 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HOXC11O43248 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC11O43248 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC11O43248 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXC11O43248 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC11O43248 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HOXC11O43248 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 HLA-A-202ENST00000376806 1854 ntBASIC16.63■□□□□ 0.25
HOXC11O43248 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC11O43248 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC11O43248 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HOXC11O43248 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 AC078925.2-201ENST00000624013 1973 ntBASIC16.62■□□□□ 0.25
HOXC11O43248 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC11O43248 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.62■□□□□ 0.25
HOXC11O43248 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 AC104794.3-201ENST00000566840 1248 ntBASIC16.62■□□□□ 0.25
HOXC11O43248 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.62■□□□□ 0.25
HOXC11O43248 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC11O43248 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 MIR4321-201ENST00000592276 80 ntBASIC16.62■□□□□ 0.25
HOXC11O43248 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC11O43248 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HOXC11O43248 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC11O43248 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC11O43248 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC11O43248 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HOXC11O43248 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC11O43248 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC11O43248 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.61■□□□□ 0.25
HOXC11O43248 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HOXC11O43248 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC11O43248 AL353779.1-201ENST00000434793 351 ntBASIC16.61■□□□□ 0.25
HOXC11O43248 AC114501.2-201ENST00000439631 535 ntBASIC16.61■□□□□ 0.25
HOXC11O43248 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.61■□□□□ 0.25
HOXC11O43248 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HOXC11O43248 CR383656.12-201ENST00000549567 513 ntBASIC16.61■□□□□ 0.25
HOXC11O43248 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.61■□□□□ 0.25
HOXC11O43248 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.61■□□□□ 0.25
HOXC11O43248 AC044860.1-202ENST00000559481 777 ntBASIC16.61■□□□□ 0.25
HOXC11O43248 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HOXC11O43248 AL596325.1-201ENST00000563991 1082 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms