Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AC107890.1-201ENST00000422478 521 ntBASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 SPDYE14P-201ENST00000442619 822 ntBASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 RNA5SP421-201ENST00000516864 134 ntBASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AL138918.1-201ENST00000568306 659 ntBASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AC051619.7-201ENST00000568314 623 ntBASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 AL390955.2-201ENST00000603032 514 ntBASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA3F8WFD2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 KRT18P34-201ENST00000488218 1270 ntBASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 INGX-202ENST00000489074 768 ntBASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 ALG1L8P-201ENST00000533887 760 ntBASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 AL139011.1-202ENST00000642063 584 ntBASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPA3F8WFD2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.96□□□□□ -0.02
NPIPA3F8WFD2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA3F8WFD2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms