Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM88BA6NKF7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TMEM88BA6NKF7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
TMEM88BA6NKF7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM88BA6NKF7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.77■□□□□ 0.59
TMEM88BA6NKF7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM88BA6NKF7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 AC018735.1-201ENST00000437208 1502 ntBASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 AP001505.2-201ENST00000616815 443 ntBASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM88BA6NKF7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 RN7SL818P-201ENST00000485099 259 ntBASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 RN7SL725P-201ENST00000606439 259 ntBASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 AC116353.5-201ENST00000638148 1699 ntBASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 AC012317.2-201ENST00000623305 2251 ntBASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM88BA6NKF7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM88BA6NKF7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms