Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC005089.1-201ENST00000619486 2241 ntBASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 AK4P3-201ENST00000418260 669 ntBASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 PRYP5-201ENST00000451909 266 ntBASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 AC087163.2-201ENST00000457299 853 ntBASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 AC006011.2-201ENST00000621313 1158 ntBASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRBV3S1A0A5B6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 AC233702.3-201ENST00000578656 1387 ntBASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 NTF6B-201ENST00000591913 560 ntBASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 AC005363.2-201ENST00000618631 242 ntBASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV3S1A0A5B6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AC090616.6-203ENST00000579186 1945 ntBASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ABCD1P5-201ENST00000445663 754 ntBASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AL671277.2-201ENST00000458060 996 ntBASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms