Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AC027307.2-201ENST00000591252 911 ntBASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AC022145.2-201ENST00000598203 171 ntBASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 AL118508.1-201ENST00000613502 2345 ntBASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAI2Q9Y5P3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AL592309.1-201ENST00000443127 649 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AC005498.2-205ENST00000593218 784 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AC008267.7-201ENST00000624570 1194 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AF228730.6-201ENST00000641497 218 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AC084121.3-201ENST00000641716 218 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AC105233.6-201ENST00000642093 218 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 AL662844.4-201ENST00000606367 2838 ntBASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
RAI2Q9Y5P3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AC004461.1-201ENST00000412461 403 ntBASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AC093724.1-201ENST00000448659 1027 ntBASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 IGHV3-62-201ENST00000520057 340 ntBASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 LINC01225-203ENST00000563550 1244 ntBASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.6■□□□□ 0.25
RAI2Q9Y5P3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms