Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AL513523.2-202ENST00000427283 2040 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 AC012569.1-201ENST00000591191 1524 ntBASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA6Q9Y5G7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 FER1L4-210ENST00000615531 5998 ntBASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AL353732.1-201ENST00000569618 1459 ntBASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 KRT8P23-201ENST00000560090 1207 ntBASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AL009183.1-201ENST00000603760 355 ntBASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AP001059.3-201ENST00000619053 235 ntBASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 AL596257.1-201ENST00000641463 2694 ntBASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PCDHGA6Q9Y5G7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 HCG4-201ENST00000418983 998 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 KRT18P32-201ENST00000424695 1287 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 RNA5SP421-201ENST00000516864 134 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 AC124947.2-201ENST00000547118 1133 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 Z92544.3-201ENST00000624747 417 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 AC084121.4-201ENST00000641598 221 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 AF228730.8-201ENST00000642140 221 ntBASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA6Q9Y5G7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms