Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 SLC22A20-204ENST00000530038 1673 ntBASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 TUBB3P1-201ENST00000405796 1332 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 RNU1-129P-201ENST00000384064 167 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AC069262.1-201ENST00000539058 672 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 KRT8P23-201ENST00000560090 1207 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 U1.21-201ENST00000580816 167 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AP001059.3-201ENST00000619053 235 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 PCDHA14-201ENST00000506751 2298 ntBASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA1Q9UND3 KRT8P49-201ENST00000604166 1432 ntBASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 GPS2P2-201ENST00000430745 888 ntBASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 RNA5SP421-201ENST00000516864 134 ntBASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AL512356.2-201ENST00000546955 174 ntBASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 LINC01225-203ENST00000563550 1244 ntBASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AC131009.4-201ENST00000624048 1740 ntBASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA1Q9UND3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms