Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 HCG4B-203ENST00000450128 991 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 SLC25A6P2-201ENST00000497974 877 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 KRT18P58-201ENST00000527480 1120 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 DUX4L17-201ENST00000557360 1267 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 AC091167.2-201ENST00000579581 588 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 AC005412.3-201ENST00000580309 715 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 REXO1L3P-201ENST00000622202 1288 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 KRT8P49-201ENST00000604166 1432 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 AC096734.2-201ENST00000562054 433 ntBASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 OR7E47P-204ENST00000575924 449 ntBASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 AC144831.1-201ENST00000573312 2656 ntBASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.06■□□□□ 0.16
CLK4Q9HAZ1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLK4Q9HAZ1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms