Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GGT4P-201ENST00000623672 1708 ntBASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 FUT8-AS1-201ENST00000621019 1521 ntBASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LCE3DQ9BYE3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 AC097637.2-201ENST00000624096 1997 ntBASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 AC013268.4-201ENST00000637413 2228 ntBASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms