Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NKILA-202ENST00000614771 2598 ntBASIC17.08■□□□□ 0.32
LRRC3Q9BY71 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AL596325.1-201ENST00000563991 1082 ntBASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AC010336.2-201ENST00000564226 506 ntBASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AC024267.1-201ENST00000582320 895 ntBASIC17.07■□□□□ 0.32
LRRC3Q9BY71 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 AC004233.3-201ENST00000607794 1269 ntBASIC17.07■□□□□ 0.32
LRRC3Q9BY71 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC3Q9BY71 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SPDYE17-201ENST00000412399 783 ntBASIC17.06■□□□□ 0.32
LRRC3Q9BY71 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 HLA-J-202ENST00000469281 1241 ntBASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 AC004790.1-201ENST00000612686 536 ntBASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 AC011676.5-201ENST00000624864 2660 ntBASIC17.06■□□□□ 0.32
LRRC3Q9BY71 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC3Q9BY71 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LRRC3Q9BY71 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms