Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 UNC93B2-201ENST00000285383 730 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 RBM17P1-201ENST00000453646 1190 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 AC034232.1-201ENST00000506026 1064 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 AL359736.2-201ENST00000621992 437 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 KRT8P49-201ENST00000604166 1432 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 CICP23-201ENST00000605013 2741 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 LINC00528-201ENST00000600723 2160 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 PCDHA3-202ENST00000532566 4594 ntBASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.95□□□□□ -0.18
SEC22CQ9BRL7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AL031731.1-201ENST00000642131 2094 ntBASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AC103564.2-201ENST00000432853 1299 ntBASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AP000525.1-201ENST00000608286 694 ntBASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 AL512652.2-201ENST00000625156 1716 ntBASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SEC22CQ9BRL7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms