Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC85AQ96PX6 OR6D1P-203ENST00000641209 4860 ntBASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 PCGF3-213ENST00000620529 1899 ntBASIC20.33■□□□□ 0.84
CCDC85AQ96PX6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC087499.5-201ENST00000452760 1342 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 GNAQP1-201ENST00000444815 1067 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 SPTLC1P1-201ENST00000447199 261 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC005225.4-201ENST00000557330 545 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC061975.2-201ENST00000581722 295 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC009118.2-201ENST00000613275 655 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AL662799.1-202ENST00000614205 422 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 AC005052.1-201ENST00000625181 2492 ntBASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC85AQ96PX6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 HLA-A-202ENST00000376806 1854 ntBASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC85AQ96PX6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms