Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 KLF2P3-201ENST00000451977 1087 ntBASIC17.8■□□□□ 0.44
ACAP3Q96P50 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ACAP3Q96P50 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ACAP3Q96P50 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 CROCCP1-201ENST00000426910 5675 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 AL589702.1-201ENST00000641229 1509 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 AC005622.1-201ENST00000636801 1703 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 AGGF1P2-201ENST00000426656 2106 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 HMGN1P19-201ENST00000436976 333 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 AC125807.1-201ENST00000483097 614 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 RNA5SP410-201ENST00000516285 106 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 DUX4L27-201ENST00000554796 1261 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 AC003101.2-201ENST00000612557 442 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.79■□□□□ 0.44
ACAP3Q96P50 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACAP3Q96P50 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ACAP3Q96P50 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.78■□□□□ 0.44
ACAP3Q96P50 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
ACAP3Q96P50 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ACAP3Q96P50 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.78■□□□□ 0.44
ACAP3Q96P50 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.78■□□□□ 0.44
ACAP3Q96P50 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACAP3Q96P50 MIR770-201ENST00000390219 98 ntBASIC17.78■□□□□ 0.44
ACAP3Q96P50 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms