Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 LINC02447-202ENST00000501888 2146 ntBASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 AC008677.1-201ENST00000519230 1561 ntBASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM5Q96HC4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 AC073389.1-201ENST00000595595 795 ntBASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 AC099522.2-201ENST00000607001 744 ntBASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM5Q96HC4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 PRYP6-201ENST00000514804 343 ntBASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDLIM5Q96HC4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.02■□□□□ 0.15
PDLIM5Q96HC4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDLIM5Q96HC4 PMS2P7-201ENST00000506558 1336 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms