Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17■□□□□ 0.31
IFT43Q96FT9 HCG4-201ENST00000418983 998 ntBASIC17■□□□□ 0.31
IFT43Q96FT9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
IFT43Q96FT9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17■□□□□ 0.31
IFT43Q96FT9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17■□□□□ 0.31
IFT43Q96FT9 HTR5BP-201ENST00000430851 1154 ntBASIC17■□□□□ 0.31
IFT43Q96FT9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
IFT43Q96FT9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17■□□□□ 0.31
IFT43Q96FT9 AC087641.1-201ENST00000557561 1021 ntBASIC17■□□□□ 0.31
IFT43Q96FT9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17■□□□□ 0.31
IFT43Q96FT9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 FLJ16779-201ENST00000612722 7638 ntBASIC17■□□□□ 0.31
IFT43Q96FT9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
IFT43Q96FT9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17■□□□□ 0.31
IFT43Q96FT9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IFT43Q96FT9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17■□□□□ 0.31
IFT43Q96FT9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17■□□□□ 0.31
IFT43Q96FT9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IFT43Q96FT9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17■□□□□ 0.31
IFT43Q96FT9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IFT43Q96FT9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC132872.4-202ENST00000622924 2756 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 FAM185BP-201ENST00000443595 716 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 ACTG1P14-201ENST00000446382 1122 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 MIR4469-201ENST00000583919 79 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 AL513190.1-201ENST00000621254 727 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC004877.2-201ENST00000623941 599 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 AC010507.1-201ENST00000633895 436 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 SLC22A20-204ENST00000530038 1673 ntBASIC16.99■□□□□ 0.31
IFT43Q96FT9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IFT43Q96FT9 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.99■□□□□ 0.31
IFT43Q96FT9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms