Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 TFAMP1-201ENST00000412727 736 ntBASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 ADH5P3-201ENST00000433842 1137 ntBASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 AL391256.1-201ENST00000443260 1855 ntBASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 AC079328.2-201ENST00000561241 3354 ntBASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SH3KBP1Q96B97 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TSEN15P1-201ENST00000423257 515 ntBASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 AC092474.2-201ENST00000424288 719 ntBASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 PCDHB19P-201ENST00000570871 2371 ntBASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SH3KBP1Q96B97 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 AC092171.3-201ENST00000610122 2651 ntBASIC16.3■□□□□ 0.2
SH3KBP1Q96B97 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms