Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 AL589702.1-201ENST00000641229 1509 ntBASIC16.29■□□□□ 0.2
SCAMP4Q969E2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 RARRES2P9-201ENST00000565168 469 ntBASIC16.29■□□□□ 0.2
SCAMP4Q969E2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 AC008677.1-201ENST00000519230 1561 ntBASIC16.29■□□□□ 0.2
SCAMP4Q969E2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCAMP4Q969E2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AL645939.2-201ENST00000427340 991 ntBASIC16.28■□□□□ 0.2
SCAMP4Q969E2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AL512356.2-201ENST00000546955 174 ntBASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC027796.2-201ENST00000575326 344 ntBASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC106028.4-201ENST00000614509 607 ntBASIC16.28■□□□□ 0.2
SCAMP4Q969E2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SCAMP4Q969E2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SCAMP4Q969E2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms