Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
USP9XQ93008 AC018735.1-201ENST00000437208 1502 ntBASIC14.1□□□□□ -0.15
USP9XQ93008 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.1□□□□□ -0.15
USP9XQ93008 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 AC009113.1-201ENST00000570267 2443 ntBASIC14.1□□□□□ -0.15
USP9XQ93008 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
USP9XQ93008 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.1□□□□□ -0.15
USP9XQ93008 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.1□□□□□ -0.15
USP9XQ93008 AC104784.1-201ENST00000473096 294 ntBASIC14.1□□□□□ -0.15
USP9XQ93008 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.1□□□□□ -0.15
USP9XQ93008 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
USP9XQ93008 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.1□□□□□ -0.15
USP9XQ93008 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.1□□□□□ -0.15
USP9XQ93008 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
USP9XQ93008 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USP9XQ93008 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 AC106760.1-201ENST00000508690 800 ntBASIC14.09□□□□□ -0.15
USP9XQ93008 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 AL096828.3-201ENST00000615354 462 ntBASIC14.09□□□□□ -0.15
USP9XQ93008 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
USP9XQ93008 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
USP9XQ93008 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 AC134312.5-201ENST00000568031 1313 ntBASIC14.09□□□□□ -0.15
USP9XQ93008 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 SLC25A24-204ENST00000569674 2357 ntBASIC14.09□□□□□ -0.15
USP9XQ93008 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
USP9XQ93008 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.09□□□□□ -0.15
USP9XQ93008 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 AC133539.2-201ENST00000604757 467 ntBASIC14.09□□□□□ -0.15
USP9XQ93008 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
USP9XQ93008 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
USP9XQ93008 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USP9XQ93008 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
USP9XQ93008 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USP9XQ93008 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USP9XQ93008 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
USP9XQ93008 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
USP9XQ93008 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
USP9XQ93008 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.08□□□□□ -0.16
USP9XQ93008 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.08□□□□□ -0.16
USP9XQ93008 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 AC134915.1-201ENST00000426461 574 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.08□□□□□ -0.16
USP9XQ93008 MTX1P1-201ENST00000440904 838 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 AL139010.1-201ENST00000454878 894 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 FAM86LP-201ENST00000478302 853 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.08□□□□□ -0.16
USP9XQ93008 AL359711.2-201ENST00000563105 872 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
USP9XQ93008 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 MIR3907-201ENST00000579424 151 ntBASIC14.08□□□□□ -0.16
USP9XQ93008 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
USP9XQ93008 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.08□□□□□ -0.16
USP9XQ93008 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms