Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 MBP-227ENST00000526111 581 ntTSL 4 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 AL391256.1-201ENST00000443260 1855 ntBASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 AL691432.1-201ENST00000596308 1422 ntBASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 AC018635.2-201ENST00000608625 364 ntBASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.44■■□□□ 1.02
COL22A1Q8NFW1 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 HNRNPUP1-201ENST00000554987 333 ntBASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 MIR5572-201ENST00000583188 137 ntBASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 AC092068.3-201ENST00000587894 2016 ntBASIC21.43■■□□□ 1.02
COL22A1Q8NFW1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 AC015910.1-201ENST00000579400 975 ntBASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 AP001505.2-201ENST00000616815 443 ntBASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL22A1Q8NFW1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 MIR1202-201ENST00000408529 83 ntBASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 RPL17P11-201ENST00000417593 544 ntBASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 AC243562.2-201ENST00000561247 970 ntBASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 AL451050.2-201ENST00000606967 682 ntBASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 AC104581.1-202ENST00000635932 2618 ntBASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
COL22A1Q8NFW1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL22A1Q8NFW1 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms