Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NUP35Q8NFH5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.35□□□□□ -0.43
NUP35Q8NFH5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NUP35Q8NFH5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 LINC01144-201ENST00000626198 1710 ntBASIC12.34□□□□□ -0.43
NUP35Q8NFH5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 PCGF3-213ENST00000620529 1899 ntBASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 LINC01101-201ENST00000622953 1884 ntBASIC12.34□□□□□ -0.43
NUP35Q8NFH5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 FAM87A-204ENST00000613235 858 ntBASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ITM2C-210ENST00000620962 501 ntBASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 SBF1P1-201ENST00000444527 5631 ntBASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NUP35Q8NFH5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
NUP35Q8NFH5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NUP35Q8NFH5 AC092919.2-201ENST00000623631 1645 ntBASIC12.33□□□□□ -0.43
NUP35Q8NFH5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
NUP35Q8NFH5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 AC005332.3-201ENST00000589904 676 ntBASIC12.33□□□□□ -0.44
NUP35Q8NFH5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 GRK6P1-201ENST00000400595 1711 ntBASIC12.33□□□□□ -0.44
NUP35Q8NFH5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 OR2I1P-209ENST00000641730 5365 ntBASIC12.33□□□□□ -0.44
NUP35Q8NFH5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NUP35Q8NFH5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms