Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CCDC170Q8IYT3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC170Q8IYT3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CCDC170Q8IYT3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC170Q8IYT3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC170Q8IYT3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC170Q8IYT3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC170Q8IYT3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CCDC170Q8IYT3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 AC073347.1-201ENST00000421633 2643 ntBASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 ELK2BP-201ENST00000415014 1224 ntBASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC170Q8IYT3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 AC006557.2-201ENST00000592985 1240 ntBASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 AL358472.4-201ENST00000633140 710 ntBASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 AC144831.1-201ENST00000573312 2656 ntBASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC170Q8IYT3 AC013268.4-201ENST00000637413 2228 ntBASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 SCARNA2-201ENST00000458748 420 ntBASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC170Q8IYT3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC170Q8IYT3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC170Q8IYT3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms