Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.29■□□□□ 0.36
SCUBE3Q8IX30 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.28■□□□□ 0.36
SCUBE3Q8IX30 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 REXO1L8P-201ENST00000604378 1897 ntBASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 DNAJB3-202ENST00000449667 1266 ntBASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 AC098799.1-201ENST00000504752 800 ntBASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 AL596442.2-201ENST00000610240 980 ntBASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.27■□□□□ 0.36
SCUBE3Q8IX30 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SCUBE3Q8IX30 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 MIR346-201ENST00000362234 95 ntBASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 AC069335.1-201ENST00000489972 472 ntBASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms