Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AL009183.1-201ENST00000603760 355 ntBASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AC064836.3-201ENST00000607928 673 ntBASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AC004877.2-201ENST00000623941 599 ntBASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 BCAR1-209ENST00000546196 1340 ntBASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AC016027.1-202ENST00000607927 1699 ntBASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE8Q86YQ8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 AP005117.1-202ENST00000581724 1908 ntBASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 AL596257.1-201ENST00000641463 2694 ntBASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 AC021097.1-201ENST00000607902 574 ntBASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 AL513190.1-201ENST00000621254 727 ntBASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CPNE8Q86YQ8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 OR6D1P-203ENST00000641209 4860 ntBASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE8Q86YQ8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms