Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 AC104306.2-201ENST00000451877 341 ntBASIC20.31■□□□□ 0.84
COL23A1Q86Y22 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 AC093433.1-201ENST00000458048 571 ntBASIC20.31■□□□□ 0.84
COL23A1Q86Y22 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ACTG1P17-201ENST00000558391 1119 ntBASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 MIR6727-201ENST00000620702 65 ntBASIC20.31■□□□□ 0.84
COL23A1Q86Y22 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 AZGP1P1-201ENST00000411909 902 ntBASIC20.3■□□□□ 0.84
COL23A1Q86Y22 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 AC009486.1-201ENST00000569860 813 ntBASIC20.3■□□□□ 0.84
COL23A1Q86Y22 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL23A1Q86Y22 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 GNRHR2-203ENST00000581100 1187 ntBASIC20.29■□□□□ 0.84
COL23A1Q86Y22 MIR4321-201ENST00000592276 80 ntBASIC20.29■□□□□ 0.84
COL23A1Q86Y22 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 GGT4P-201ENST00000623672 1708 ntBASIC20.29■□□□□ 0.84
COL23A1Q86Y22 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
COL23A1Q86Y22 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms