Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CTR9Q6PD62 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.5■□□□□ 0.71
CTR9Q6PD62 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 LINC01144-201ENST00000626198 1710 ntBASIC19.49■□□□□ 0.71
CTR9Q6PD62 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 AL162727.3-201ENST00000635661 2787 ntBASIC19.49■□□□□ 0.71
CTR9Q6PD62 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.49■□□□□ 0.71
CTR9Q6PD62 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTR9Q6PD62 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTR9Q6PD62 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 AC125807.1-201ENST00000483097 614 ntBASIC19.48■□□□□ 0.71
CTR9Q6PD62 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CTR9Q6PD62 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 AC005622.1-201ENST00000636801 1703 ntBASIC19.48■□□□□ 0.71
CTR9Q6PD62 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTR9Q6PD62 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 AC003101.2-201ENST00000612557 442 ntBASIC19.47■□□□□ 0.71
CTR9Q6PD62 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms