Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AC010654.1-201ENST00000615722 808 ntBASIC16.64■□□□□ 0.25
LGSNQ5TDP6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AC092384.3-202ENST00000564646 2873 ntBASIC16.64■□□□□ 0.25
LGSNQ5TDP6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 AC087641.1-201ENST00000557561 1021 ntBASIC16.63■□□□□ 0.25
LGSNQ5TDP6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 LINC02447-202ENST00000501888 2146 ntBASIC16.63■□□□□ 0.25
LGSNQ5TDP6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LGSNQ5TDP6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CDC14C-201ENST00000428251 1719 ntBASIC16.62■□□□□ 0.25
LGSNQ5TDP6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 MIR648-201ENST00000385046 94 ntBASIC16.62■□□□□ 0.25
LGSNQ5TDP6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 PCDHA3-202ENST00000532566 4594 ntBASIC16.62■□□□□ 0.25
LGSNQ5TDP6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
LGSNQ5TDP6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms