Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.72■□□□□ 0.11
SPIN4Q56A73 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 AL009183.1-201ENST00000603760 355 ntBASIC15.72■□□□□ 0.11
SPIN4Q56A73 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.72■□□□□ 0.11
SPIN4Q56A73 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SPIN4Q56A73 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.72■□□□□ 0.11
SPIN4Q56A73 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SPIN4Q56A73 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SPIN4Q56A73 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPIN4Q56A73 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 AC024909.3-201ENST00000611513 2257 ntBASIC15.71■□□□□ 0.11
SPIN4Q56A73 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 MIR648-201ENST00000385046 94 ntBASIC15.71■□□□□ 0.11
SPIN4Q56A73 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPIN4Q56A73 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.71■□□□□ 0.11
SPIN4Q56A73 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.71■□□□□ 0.1
SPIN4Q56A73 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.71■□□□□ 0.1
SPIN4Q56A73 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SPIN4Q56A73 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPIN4Q56A73 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPIN4Q56A73 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPIN4Q56A73 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AC104109.2-201ENST00000602919 1418 ntBASIC15.7■□□□□ 0.1
SPIN4Q56A73 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AC140658.5-201ENST00000438532 169 ntBASIC15.7■□□□□ 0.1
SPIN4Q56A73 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 KRT18P34-201ENST00000488218 1270 ntBASIC15.7■□□□□ 0.1
SPIN4Q56A73 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPIN4Q56A73 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPIN4Q56A73 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms