Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.89■□□□□ 0.29
ALFQ53S48 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.89■□□□□ 0.29
ALFQ53S48 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
ALFQ53S48 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.89■□□□□ 0.29
ALFQ53S48 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.89■□□□□ 0.29
ALFQ53S48 METTL21AP1-201ENST00000438852 635 ntBASIC16.89■□□□□ 0.29
ALFQ53S48 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 AC109322.1-201ENST00000524499 1264 ntBASIC16.89■□□□□ 0.29
ALFQ53S48 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.89■□□□□ 0.29
ALFQ53S48 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.89■□□□□ 0.29
ALFQ53S48 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.89■□□□□ 0.29
ALFQ53S48 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.89■□□□□ 0.29
ALFQ53S48 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
ALFQ53S48 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.88■□□□□ 0.29
ALFQ53S48 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 RBPMS2P1-201ENST00000437762 623 ntBASIC16.88■□□□□ 0.29
ALFQ53S48 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 HLA-J-203ENST00000494367 1087 ntBASIC16.88■□□□□ 0.29
ALFQ53S48 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.88■□□□□ 0.29
ALFQ53S48 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.88■□□□□ 0.29
ALFQ53S48 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 AC092364.2-201ENST00000596710 2692 ntBASIC16.88■□□□□ 0.29
ALFQ53S48 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ALFQ53S48 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ALFQ53S48 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ALFQ53S48 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ALFQ53S48 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.87■□□□□ 0.29
ALFQ53S48 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.87■□□□□ 0.29
ALFQ53S48 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.87■□□□□ 0.29
ALFQ53S48 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ALFQ53S48 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.87■□□□□ 0.29
ALFQ53S48 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.87■□□□□ 0.29
ALFQ53S48 LINC00628-201ENST00000628516 1289 ntBASIC16.87■□□□□ 0.29
ALFQ53S48 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms