| APLP2 | Q06481 | LIPE-AS1-201 | ENST00000457234 | 1501 nt | TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC005622.1-201 | ENST00000636801 | 1703 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | HIBCH-201 | ENST00000359678 | 1939 nt | APPRIS P1 TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | MRTO4-201 | ENST00000330263 | 2315 nt | APPRIS P1 TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ARNT-212 | ENST00000515192 | 2892 nt | TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | TSC22D3-203 | ENST00000372383 | 2266 nt | TSL 2 BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | MFNG-201 | ENST00000356998 | 2088 nt | APPRIS P1 TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | FAM131A-203 | ENST00000383847 | 1483 nt | APPRIS P1 TSL 2 BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | H3F3C-201 | ENST00000340398 | 1057 nt | APPRIS P1 BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | HLA-H-201 | ENST00000383620 | 1096 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | CNN2P2-201 | ENST00000443536 | 909 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | FAM86GP-201 | ENST00000448322 | 971 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | CNN2P3-201 | ENST00000450201 | 906 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | IQSEC2-204 | ENST00000485377 | 835 nt | TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ZIC4-214 | ENST00000491672 | 925 nt | TSL 4 BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC069262.1-201 | ENST00000539058 | 672 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | RARRES2P9-201 | ENST00000565168 | 469 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC106028.4-201 | ENST00000614509 | 607 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AL136317.3-201 | ENST00000618497 | 906 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | RASAL2-AS1-202 | ENST00000421505 | 2329 nt | TSL 1 (best) BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | GOLGA2P9-201 | ENST00000596977 | 1937 nt | BASIC | 25.69 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SWAP70-202 | ENST00000447399 | 3538 nt | TSL 2 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SCP2-201 | ENST00000371509 | 1889 nt | TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | BRD2-201 | ENST00000374825 | 4894 nt | APPRIS P3 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PHF20L1-220 | ENST00000622263 | 3375 nt | APPRIS P1 TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PSEN2-211 | ENST00000626989 | 1972 nt | TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | C1orf43-201 | ENST00000350592 | 1610 nt | TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | HIST2H3D-201 | ENST00000331491 | 411 nt | APPRIS P1 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | CD81-202 | ENST00000381036 | 880 nt | TSL 3 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | HIST2H3PS2-201 | ENST00000392948 | 411 nt | APPRIS P1 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC092809.2-202 | ENST00000436706 | 790 nt | TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | CTDSP1-204 | ENST00000443891 | 1109 nt | TSL 3 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | OST4-203 | ENST00000456793 | 561 nt | APPRIS P1 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC092691.1-201 | ENST00000484092 | 554 nt | TSL 4 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC020659.2-201 | ENST00000510176 | 585 nt | TSL 4 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | RFPL4AP1-201 | ENST00000530883 | 850 nt | BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC131009.1-201 | ENST00000539078 | 426 nt | TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC244153.1-203 | ENST00000622796 | 419 nt | TSL 2 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ARMC5-203 | ENST00000457010 | 4844 nt | APPRIS P3 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | NPM1-201 | ENST00000296930 | 1758 nt | APPRIS P1 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SLC5A2-201 | ENST00000330498 | 2271 nt | APPRIS P1 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AL731569.1-201 | ENST00000428940 | 3058 nt | TSL 2 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | MIER1-205 | ENST00000371014 | 1728 nt | TSL 2 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ADGRB2-203 | ENST00000398538 | 4675 nt | APPRIS ALT2 TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SARDH-205 | ENST00000422262 | 2367 nt | TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SRPX-201 | ENST00000378533 | 1874 nt | APPRIS P3 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SLC9A2-201 | ENST00000233969 | 5410 nt | APPRIS P1 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PPP1R26-202 | ENST00000401470 | 4769 nt | APPRIS P1 TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | IRF9-203 | ENST00000557894 | 1391 nt | TSL 5 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PITPNM2-AS1-201 | ENST00000506255 | 2191 nt | TSL 2 BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PCM1-206 | ENST00000518537 | 2171 nt | TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SEPHS1-201 | ENST00000327347 | 3273 nt | APPRIS P1 TSL 1 (best) BASIC | 25.68 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | NEK2-202 | ENST00000366999 | 2131 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | TRPC6-202 | ENST00000348423 | 2448 nt | TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | IL3RA-202 | ENST00000381469 | 1476 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | LMBR1-202 | ENST00000359422 | 4727 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC008969.1-201 | ENST00000550135 | 6438 nt | TSL 2 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AIFM1-202 | ENST00000319908 | 2248 nt | APPRIS ALT2 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | GOLGA2-213 | ENST00000610329 | 2212 nt | TSL 2 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PIEZO1-201 | ENST00000301015 | 8072 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ID3-201 | ENST00000374561 | 1251 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | TMEM91-205 | ENST00000436170 | 864 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | APBB2-208 | ENST00000504305 | 1274 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SMIM15-AS1-201 | ENST00000506902 | 796 nt | TSL 3 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | UBE2V2-201 | ENST00000517630 | 612 nt | TSL 4 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC021744.1-201 | ENST00000518354 | 453 nt | TSL 3 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | KPNA2-202 | ENST00000537025 | 2456 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | MIR6080-201 | ENST00000617359 | 66 nt | BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AL356481.3-201 | ENST00000630523 | 575 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | WDR45-239 | ENST00000634944 | 1745 nt | APPRIS P1 TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AL157832.3-201 | ENST00000635764 | 1005 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | CHUK-201 | ENST00000370397 | 3625 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PAPLN-202 | ENST00000340738 | 5834 nt | APPRIS P2 TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ZNF408-201 | ENST00000311764 | 2442 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | EPB41-205 | ENST00000373797 | 2402 nt | TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | GGT5-203 | ENST00000398292 | 2408 nt | APPRIS ALT2 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | TCF3-204 | ENST00000453954 | 3585 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | METTL9-201 | ENST00000358154 | 3256 nt | APPRIS P3 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | FBLIM1-201 | ENST00000332305 | 1530 nt | TSL 2 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | NSFL1C-206 | ENST00000476071 | 2800 nt | TSL 5 BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | BEND4-201 | ENST00000502486 | 8765 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ABCC5-203 | ENST00000382494 | 1923 nt | TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | CDS1-201 | ENST00000295887 | 4461 nt | APPRIS P1 TSL 1 (best) BASIC | 25.67 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | LY6K-205 | ENST00000522591 | 2724 nt | APPRIS ALT2 TSL 2 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | HOXB1-201 | ENST00000239174 | 2020 nt | APPRIS P1 TSL 1 (best) BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | FUT3-202 | ENST00000458379 | 2024 nt | APPRIS P1 TSL 1 (best) BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | SLC10A3-204 | ENST00000393587 | 1862 nt | APPRIS P3 TSL 2 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | ANXA8-203 | ENST00000583874 | 1860 nt | TSL 1 (best) BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AHDC1-202 | ENST00000374011 | 6438 nt | APPRIS P1 TSL 5 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | RNF157-202 | ENST00000319945 | 2937 nt | APPRIS ALT2 TSL 2 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | MBNL1-201 | ENST00000282486 | 6422 nt | APPRIS P4 TSL 5 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | FAM222B-211 | ENST00000582266 | 2613 nt | TSL 1 (best) BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | C11orf71-201 | ENST00000325636 | 652 nt | APPRIS P3 TSL 1 (best) BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | UGGT2-202 | ENST00000376714 | 1233 nt | TSL 1 (best) BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | TMEM191A-202 | ENST00000419950 | 663 nt | TSL 3 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | PRRT3-AS1-201 | ENST00000431558 | 614 nt | TSL 2 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | AC067863.1-201 | ENST00000494933 | 530 nt | BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | RNA5SP410-201 | ENST00000516285 | 106 nt | BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | UGGT2-212 | ENST00000621375 | 1004 nt | TSL 5 BASIC | 25.66 | ■■□□□ 1.7 | | |
| APLP2 | Q06481 | UGGT2-213 | ENST00000638479 | 1010 nt | TSL 5 BASIC | 25.66 | ■■□□□ 1.7 | | |