Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX1P83916 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX1P83916 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX1P83916 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX1P83916 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 SOX15-203ENST00000570788 1093 ntBASIC17.22■□□□□ 0.35
CBX1P83916 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 AC008687.6-201ENST00000596318 630 ntBASIC17.22■□□□□ 0.35
CBX1P83916 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.22■□□□□ 0.35
CBX1P83916 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 GGT3P-204ENST00000453783 1664 ntBASIC17.22■□□□□ 0.35
CBX1P83916 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBX1P83916 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.22■□□□□ 0.35
CBX1P83916 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CBX1P83916 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX1P83916 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CBX1P83916 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX1P83916 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CBX1P83916 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX1P83916 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX1P83916 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX1P83916 AC004980.1-204ENST00000429707 299 ntBASIC17.21■□□□□ 0.35
CBX1P83916 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX1P83916 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX1P83916 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.21■□□□□ 0.35
CBX1P83916 AC004264.1-201ENST00000608354 794 ntBASIC17.21■□□□□ 0.35
CBX1P83916 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CBX1P83916 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.21■□□□□ 0.35
CBX1P83916 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBX1P83916 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.2■□□□□ 0.34
CBX1P83916 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CBX1P83916 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.2■□□□□ 0.34
CBX1P83916 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX1P83916 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CBX1P83916 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CBX1P83916 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms