Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.03■□□□□ 0.16
YBX1P67809 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.03■□□□□ 0.16
YBX1P67809 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.03■□□□□ 0.16
YBX1P67809 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 UPF3AP3-201ENST00000420996 769 ntBASIC16.03■□□□□ 0.16
YBX1P67809 HTR5BP-201ENST00000430851 1154 ntBASIC16.03■□□□□ 0.16
YBX1P67809 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.03■□□□□ 0.16
YBX1P67809 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.03■□□□□ 0.16
YBX1P67809 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.03■□□□□ 0.16
YBX1P67809 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.03■□□□□ 0.16
YBX1P67809 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
YBX1P67809 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
YBX1P67809 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.03■□□□□ 0.16
YBX1P67809 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
YBX1P67809 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
YBX1P67809 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 DBET-201ENST00000630918 3363 ntBASIC16.03■□□□□ 0.16
YBX1P67809 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
YBX1P67809 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
YBX1P67809 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.03■□□□□ 0.16
YBX1P67809 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
YBX1P67809 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.03■□□□□ 0.16
YBX1P67809 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.03■□□□□ 0.16
YBX1P67809 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.02■□□□□ 0.16
YBX1P67809 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.02■□□□□ 0.16
YBX1P67809 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.02■□□□□ 0.16
YBX1P67809 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
YBX1P67809 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
YBX1P67809 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.02■□□□□ 0.16
YBX1P67809 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.02■□□□□ 0.16
YBX1P67809 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.02■□□□□ 0.16
YBX1P67809 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.02■□□□□ 0.16
YBX1P67809 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.02■□□□□ 0.16
YBX1P67809 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.02■□□□□ 0.16
YBX1P67809 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
YBX1P67809 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
YBX1P67809 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.02■□□□□ 0.15
YBX1P67809 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.02■□□□□ 0.15
YBX1P67809 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.02■□□□□ 0.15
YBX1P67809 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 AL596087.1-201ENST00000400979 1969 ntBASIC16.02■□□□□ 0.15
YBX1P67809 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
YBX1P67809 AC016027.1-202ENST00000607927 1699 ntBASIC16.02■□□□□ 0.15
YBX1P67809 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
YBX1P67809 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.02■□□□□ 0.15
YBX1P67809 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
YBX1P67809 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.01■□□□□ 0.15
YBX1P67809 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 AC092850.2-201ENST00000623821 2697 ntBASIC16.01■□□□□ 0.15
YBX1P67809 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.01■□□□□ 0.15
YBX1P67809 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
YBX1P67809 KRT18P13-201ENST00000400056 1290 ntBASIC16.01■□□□□ 0.15
YBX1P67809 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
YBX1P67809 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.01■□□□□ 0.15
YBX1P67809 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.01■□□□□ 0.15
YBX1P67809 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.01■□□□□ 0.15
YBX1P67809 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms