Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.1■□□□□ 0.01
CDC42P60953 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDC42P60953 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.1■□□□□ 0.01
CDC42P60953 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 MIR648-201ENST00000385046 94 ntBASIC15.1■□□□□ 0.01
CDC42P60953 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.1■□□□□ 0.01
CDC42P60953 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 AC096582.2-201ENST00000510860 516 ntBASIC15.1■□□□□ 0.01
CDC42P60953 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.1■□□□□ 0.01
CDC42P60953 AP005901.3-202ENST00000581653 237 ntBASIC15.1■□□□□ 0.01
CDC42P60953 MPDU1-223ENST00000582151 728 ntBASIC15.1■□□□□ 0.01
CDC42P60953 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.1■□□□□ 0.01
CDC42P60953 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 AP002414.2-201ENST00000591780 3365 ntBASIC15.1■□□□□ 0.01
CDC42P60953 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42P60953 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 AC097376.2-205ENST00000610159 5334 ntBASIC15.09■□□□□ 0.01
CDC42P60953 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC42P60953 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
CDC42P60953 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC42P60953 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC42P60953 KRT18P57-201ENST00000443599 1254 ntBASIC15.09■□□□□ 0.01
CDC42P60953 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC42P60953 MIR4492-201ENST00000581627 80 ntBASIC15.09■□□□□ 0.01
CDC42P60953 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 NTF6B-201ENST00000591913 560 ntBASIC15.09■□□□□ 0.01
CDC42P60953 Z69720.1-201ENST00000601483 472 ntBASIC15.09■□□□□ 0.01
CDC42P60953 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.09■□□□□ 0.01
CDC42P60953 AC010331.1-201ENST00000611423 582 ntBASIC15.09■□□□□ 0.01
CDC42P60953 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDC42P60953 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC42P60953 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CDC42P60953 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 AC069224.1-201ENST00000566372 1715 ntBASIC15.09■□□□□ 0.01
CDC42P60953 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42P60953 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CDC42P60953 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms