Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH12P55289 REXO1L8P-201ENST00000604378 1897 ntBASIC15.38■□□□□ 0.05
CDH12P55289 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 PI4KAP1-204ENST00000612579 1703 ntBASIC15.38■□□□□ 0.05
CDH12P55289 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 AC006504.4-201ENST00000592118 1568 ntBASIC15.38■□□□□ 0.05
CDH12P55289 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH12P55289 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH12P55289 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.38■□□□□ 0.05
CDH12P55289 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH12P55289 AC087163.2-201ENST00000457299 853 ntBASIC15.38■□□□□ 0.05
CDH12P55289 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CDH12P55289 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH12P55289 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
CDH12P55289 MPDU1-223ENST00000582151 728 ntBASIC15.38■□□□□ 0.05
CDH12P55289 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CDH12P55289 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH12P55289 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH12P55289 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH12P55289 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH12P55289 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CDH12P55289 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 AC067930.6-201ENST00000623257 4947 ntBASIC15.37■□□□□ 0.05
CDH12P55289 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 AC144831.1-201ENST00000573312 2656 ntBASIC15.37■□□□□ 0.05
CDH12P55289 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
CDH12P55289 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.37■□□□□ 0.05
CDH12P55289 ELK2BP-201ENST00000415014 1224 ntBASIC15.37■□□□□ 0.05
CDH12P55289 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH12P55289 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH12P55289 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH12P55289 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH12P55289 CLEC4GP1-201ENST00000596555 870 ntBASIC15.37■□□□□ 0.05
CDH12P55289 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 AF228730.7-201ENST00000641842 219 ntBASIC15.37■□□□□ 0.05
CDH12P55289 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CDH12P55289 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.37■□□□□ 0.05
CDH12P55289 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH12P55289 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.37■□□□□ 0.05
CDH12P55289 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CDH12P55289 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDH12P55289 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH12P55289 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH12P55289 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH12P55289 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH12P55289 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH12P55289 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms