Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.22■□□□□ 0.51
LBX1P52954 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.22■□□□□ 0.51
LBX1P52954 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.22■□□□□ 0.51
LBX1P52954 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LBX1P52954 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LBX1P52954 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.21■□□□□ 0.51
LBX1P52954 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.21■□□□□ 0.51
LBX1P52954 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.21■□□□□ 0.51
LBX1P52954 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LBX1P52954 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.21■□□□□ 0.51
LBX1P52954 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.21■□□□□ 0.51
LBX1P52954 AC132938.4-201ENST00000623835 848 ntBASIC18.21■□□□□ 0.51
LBX1P52954 AC006453.4-201ENST00000636949 1252 ntBASIC18.21■□□□□ 0.51
LBX1P52954 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.21■□□□□ 0.51
LBX1P52954 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.21■□□□□ 0.51
LBX1P52954 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
LBX1P52954 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.21■□□□□ 0.51
LBX1P52954 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.21■□□□□ 0.51
LBX1P52954 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LBX1P52954 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LBX1P52954 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LBX1P52954 AC025271.4-201ENST00000621477 1726 ntBASIC18.2■□□□□ 0.5
LBX1P52954 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 ACTG1P2-201ENST00000415776 1125 ntBASIC18.2■□□□□ 0.5
LBX1P52954 ACTG1P11-201ENST00000425411 1125 ntBASIC18.2■□□□□ 0.5
LBX1P52954 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.2■□□□□ 0.5
LBX1P52954 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.2■□□□□ 0.5
LBX1P52954 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.2■□□□□ 0.5
LBX1P52954 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
LBX1P52954 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.2■□□□□ 0.5
LBX1P52954 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.2■□□□□ 0.5
LBX1P52954 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LBX1P52954 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
LBX1P52954 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LBX1P52954 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.19■□□□□ 0.5
LBX1P52954 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.19■□□□□ 0.5
LBX1P52954 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.19■□□□□ 0.5
LBX1P52954 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.19■□□□□ 0.5
LBX1P52954 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
LBX1P52954 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.19■□□□□ 0.5
LBX1P52954 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LBX1P52954 RNA5SP486-201ENST00000515961 83 ntBASIC18.19■□□□□ 0.5
LBX1P52954 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.19■□□□□ 0.5
LBX1P52954 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.19■□□□□ 0.5
LBX1P52954 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.19■□□□□ 0.5
LBX1P52954 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.19■□□□□ 0.5
LBX1P52954 AC025181.2-201ENST00000606994 802 ntBASIC18.19■□□□□ 0.5
LBX1P52954 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.19■□□□□ 0.5
LBX1P52954 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LBX1P52954 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LBX1P52954 REXO1L8P-201ENST00000604378 1897 ntBASIC18.18■□□□□ 0.5
LBX1P52954 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms