Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
USP11P51784 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.51■□□□□ 0.55
USP11P51784 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.51■□□□□ 0.55
USP11P51784 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.51■□□□□ 0.55
USP11P51784 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.51■□□□□ 0.55
USP11P51784 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.51■□□□□ 0.55
USP11P51784 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
USP11P51784 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.51■□□□□ 0.55
USP11P51784 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP11P51784 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP11P51784 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.51■□□□□ 0.55
USP11P51784 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP11P51784 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.51■□□□□ 0.55
USP11P51784 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP11P51784 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP11P51784 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
USP11P51784 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 PMS2P2-201ENST00000425039 1128 ntBASIC18.5■□□□□ 0.55
USP11P51784 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.5■□□□□ 0.55
USP11P51784 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.5■□□□□ 0.55
USP11P51784 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.5■□□□□ 0.55
USP11P51784 AC093028.1-201ENST00000622998 982 ntBASIC18.5■□□□□ 0.55
USP11P51784 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 AC008677.1-201ENST00000519230 1561 ntBASIC18.5■□□□□ 0.55
USP11P51784 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP11P51784 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP11P51784 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
USP11P51784 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
USP11P51784 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP11P51784 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 PCDHB19P-201ENST00000570871 2371 ntBASIC18.49■□□□□ 0.55
USP11P51784 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
USP11P51784 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.49■□□□□ 0.55
USP11P51784 AL645939.2-201ENST00000427340 991 ntBASIC18.49■□□□□ 0.55
USP11P51784 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.49■□□□□ 0.55
USP11P51784 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.49■□□□□ 0.55
USP11P51784 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.49■□□□□ 0.55
USP11P51784 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms