Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PCP4P48539 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
PCP4P48539 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.08□□□□□ -0.64
PCP4P48539 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PCP4P48539 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.08□□□□□ -0.64
PCP4P48539 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PCP4P48539 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC11.08□□□□□ -0.64
PCP4P48539 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 AC093525.9-201ENST00000624961 1746 ntBASIC11.08□□□□□ -0.64
PCP4P48539 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC11.08□□□□□ -0.64
PCP4P48539 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.08□□□□□ -0.64
PCP4P48539 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PCP4P48539 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
PCP4P48539 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.08□□□□□ -0.64
PCP4P48539 MROH4P-201ENST00000431302 1578 ntBASIC11.07□□□□□ -0.64
PCP4P48539 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC11.07□□□□□ -0.64
PCP4P48539 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 LIMK1-201ENST00000336180 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
PCP4P48539 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 FCRL2-201ENST00000361516 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.07□□□□□ -0.64
PCP4P48539 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PCP4P48539 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms